Mascot Search Results

Protein View

Match to: 24945.1 Score: 29
CONTIG=Contig20147 POSCDS1=14808 POSCDS2=16370
Found in search of cw0134_q1.pkl

Nominal mass (Mr): 60037; Calculated pI value: 9.17
NCBI BLAST search of 24945.1 against nr
Unformatted sequence string for pasting into other applications

Fixed modifications: Carbamidomethyl (C)
Variable modifications: Deamidation (NQ)
Semi-specific cleavage, (peptide can be non-specific at one terminus only)
Cleavage by semiTrypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 4%

Matched peptides shown in Bold Red

     1 LFFKIVILFY CSLQMLSTMS NLPIVAGIST TATTGTTSTA TASTSTSGSV 
    51 NTTATNNNNN TSASNSTSAS SATANGGIGT NSGNSLQYYY TGNNTSNSVD 
   101 GNKYSLPSIY FTPQDSINNT SHTYNPYTTV SGAVTPQNYQ LDYSQSSTVN 
   151 NNYQFTLPNQ QLSSPQQQQQ QQYNRSYSNS LMPNYHYNNT TTNINTNVGS 
   201 NTSPQLSNSN TPNPISPVLI PDKDNTYNNT NNVLVSSYPS MTMNQIQQQQ 
   251 QQYLQPSQQY QYSYNQYYMQ PYYHNPQQSA PQQVQKPAQT EKLPHLSVTN 
   301 IDYTSLVSYT VSPSLKRKRR TAKRSLSPSS TSSLSMSINH DFTNNGTTST 
   351 STTTRSSSTS SATSSSIGVA AADSFPCPQC NKVFQKPYNL KSHMKTHSNE 
   401 KPYHCNICFK RFARSHDKKR HELLHQGVKN FKCQGYLNDG VTSWGCGKTF 
   451 ARSDALSRHF RTETGWLCIR PLMEEAKRLE EEEQQRQQQA QQQQQVPQQS 
   501 QVSEQIGVNV GEIKFNDEYY DNSNFIKKLL QSNK

  Residue Number  Increasing Mass  Decreasing Mass  

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
    93 - 103     577.30  1152.58  1151.46     1.12     0  G.NNTSNSVDGNK.Y  3 Deamidation (NQ) (Ions score 20)
   211 - 223     695.85  1389.68  1390.77    -1.09     0  N.TPNPISPVLIPDK.D  Deamidation (NQ) (Ions score 14)

Error Distribution

Mascot:  http://www.matrixscience.com/