Mascot Search Results

Protein View

Match to: 23664.1 Score: 86
CONTIG=Contig20184 POSCDS1=48545 POSCDS2=50146
Found in search of cw0134_q1.pkl

Nominal mass (Mr): 56212; Calculated pI value: 4.72
NCBI BLAST search of 23664.1 against nr
Unformatted sequence string for pasting into other applications

Fixed modifications: Carbamidomethyl (C)
Variable modifications: Deamidation (NQ)
Semi-specific cleavage, (peptide can be non-specific at one terminus only)
Cleavage by semiTrypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 2%

Matched peptides shown in Bold Red

     1 LIYQIQEIII IMKVSTIFAA ASALFAATTT LAQDVACLVD NQQVAVVDLD 
    51 TGVCPFTIPA SLAAFFTFVS LEEYNVQFYY TIVNNVRYNT DIRNAGKVIN 
   101 VPARNLYGAG AVPFFQVHLE KQLEANSTAA IRRRLMGETP IVKRDQIDDF 
   151 IASIENTEGT ALEGSTLEVV DYVPGSSSAS PSGSASPSGS ESGSGSDSAT 
   201 IRSTTVVSSS SCESSGDSAA TATGANGEST VTEQNTVVVT ITSCHNDACH 
   251 ATTVPATASI GVTTVHGTET IFTTYCPLSS YETVESTKVI TITSCSENKC 
   301 QETTVEATPS TATTVSEGVV TEYVTYCPVS SVETVASTKV ITVVACDEHK 
   351 CHETTAVATP TEVTTVVEGS TTHYVTYKPT GSGPTQGETY ATNAITSEGT 
   401 VYVPKTTAVT THGSTFETVA YITVTKATPT KGGEQHQPGS PAGAATSAPG 
   451 APAPGASGAH ASTANKVTVE AQATPGTLTP ENTVAGGVNG EQVAVSAKTT 
   501 ISQTTVAKAS GSGKAAISTF EGAAAASAGA SVLALALIPL AYFI

  Residue Number  Increasing Mass  Decreasing Mass 

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
   340 - 350     635.84  1269.66  1269.64     0.02     0  K.VITVVACDEHK.C  (Ions score 90)

Error Distribution


Mascot:  http://www.matrixscience.com/