Mascot Search Results

Protein View

Match to: 3054.1 Score: 242
|Ssr1| CONTIG=Contig10262 POSCDS1=71490 POSCDS2=72194
Found in search of cw0134_q1.pkl

Nominal mass (Mr): 22993; Calculated pI value: 4.67
NCBI BLAST search of 3054.1 against nr
Unformatted sequence string for pasting into other applications

Fixed modifications: Carbamidomethyl (C)
Variable modifications: Deamidation (NQ)
Semi-specific cleavage, (peptide can be non-specific at one terminus only)
Cleavage by semiTrypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 15%

Matched peptides shown in Bold Red

     1 MASFLKISTL IAIVSTLQTT LAAPPACLLA CVAKVEKGSK CSGLNDLSCI 
    51 CTTKNSDVEK CLKEICPNGD ADTAISAFKS SCSGYSSQSS SSESESESAS 
   101 SEESSASASA SASSSAGKSS NVEASTTKES SSAKASSSAA GSSEAVSSAT 
   151 ETASTEESSS AAASASASAS ATKESSSEAA SSTSSTLKES KTSTTAAASS 
   201 SESTTATGVL TQSEGSAAKV GLGALVGLVG AVLL

  Residue Number  Increasing Mass  Decreasing Mass  

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
    41 - 54      814.86  1627.71  1627.70     0.00     0  K.CSGLNDLSCICTTK.N  (Ions score 118)
    41 - 60      768.01  2301.00  2300.99     0.01     1  K.CSGLNDLSCICTTKNSDVEK.C  Deamidation (NQ) (Ions score 37)
    46 - 54      548.77  1095.52  1096.49    -0.97     0  N.DLSCICTTK.N  (Ions score 10)
    64 - 79      854.90  1707.78  1707.78     0.00     0  K.EICPNGDADTAISAFK.S  (Ions score 94)

Error Distribution

Mascot:  http://www.matrixscience.com/