Mascot Search Results

Protein View

Match to: 23455.1 Score: 288
CONTIG=Contig20192 POSCDS1=117993 POSCDS2=119639
Found in search of cw0134_q1.pkl

Nominal mass (M_r): 60747; Calculated pI value: 4.98
NCBI BLAST search of 23455.1 against nr
Unformatted sequence string for pasting into other applications

Fixed modifications: Carbamidomethyl (C)
Variable modifications: Deamidation (NQ)
Semi-specific cleavage, (peptide can be non-specific at one terminus only)
Cleavage by semiTrypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 11%

Matched peptides shown in Bold Red

     1 SQKKMYSLIK SLVTFATLFS LTLAKFESST PPVEVVGNKF YFSNNGSQFL 
    51 IRGIAYQQDA AGSVSSGYDA DPNRKYNDPL ADADACKRDV KYFKESNTNT 
   101 LRVYAIDPDK DHEECMKIFS DAGIYIVADL SEPTVSINRN NPEWNLDLYK 
   151 RYTKVIDKMQ EYSNVLGFFA GNEVTNNRSN TDASAFVKAA IRDMKKYIKE 
   201 SDYRQIPVGY SSNDDEEIRV AIADYFSCGS LDDRADFFGI NMYEWCGKST 
   251 FETSGYKDRT EEIKNLTIPA FFSEYGCNAN RPRLFQEIGT LYSDKMTDVW 
   301 SGGIVYMYFE EANKYGLVSV DGNSVKTLSD YNNYKSEMNK ISPSLAHTST 
   351 LSSSDASKTL QCPGTAASTW KAATNLPPTP DESYCDCISK SLECVVADDV 
   401 DKEDYGDLFG QVCGYIDCSA ISADGSKGEY GVASFCSDKD RLSYVLNQYY 
   451 LDQDKKSSAC DFKGSASINS KASASGSCKA VSGVATGKAS SSGGSSKSGS 
   501 SSASTSGSSS SSTSSGSSSS SGVKATQQMS MVKLVSIITI VTAFVGGMSV 
   551 VF

Residue Number Increasing Mass Decreasing Mass

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
    76 - 88      503.57  1507.70  1507.67     0.02     1  K.YNDPLADADACKR.D  (Ions score 39)
   103 - 117     617.28  1848.83  1848.80     0.02     1  R.VYAIDPDKDHEECMK.I  (Ions score 82)
   140 - 151     781.40  1560.78  1560.77     0.01     1  R.NNPEWNLDLYKR.Y  (Ions score 34)
   179 - 188     520.26  1038.52  1038.50     0.02     0  R.SNTDASAFVK.A  (Ions score 69)
   220 - 234     844.89  1687.76  1687.75     0.01     0  R.VAIADYFSCGSLDDR.A  (Ions score 95)

Mascot: http://www.matrixscience.com/