Mascot Search Results

Peptide View

MS/MS Fragmentation of YQVQQAQNQQ
Found in 29699.1, CONTIG=Contig10073 POSCDS1=10649 POSCDS2=13162

Match to Query 12: 1237.587648 from(619.801100,2+) intensity(9600.7236)
From data file cw0134_q1.pkl

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Monoisotopic mass of neutral peptide Mr(calc): 1237.51
Fixed modifications: Carbamidomethyl (C)
Variable modifications: 
Q2     : Deamidation (NQ)
N8     : Deamidation (NQ)
Q9     : Deamidation (NQ)
Q10    : Deamidation (NQ)
Ions Score: 23  Expect: 19  
Matches (Bold Red): 11/70 fragment ions using 20 most intense peaks
# b b++ b* b*++ Seq. y y++ y* y*++ #
1 164.07 82.54     Y         10
2 293.11 147.06 276.09 138.55 Q 1075.45 538.23 1058.43 529.72 9
3 392.18 196.59 375.16 188.08 V 946.41 473.71 929.38 465.20 8
4 520.24 260.62 503.21 252.11 Q 847.34 424.18 830.32 415.66 7
5 648.30 324.65 631.27 316.14 Q 719.28 360.15 702.26 351.63 6
6 719.34 360.17 702.31 351.66 A 591.23 296.12 574.20 287.60 5
7 847.39 424.20 830.37 415.69 Q 520.19 260.60 503.16 252.08 4
8 962.42 481.71 945.39 473.20 N 392.13 196.57 375.10 188.06 3
9 1091.46 546.24 1074.44 537.72 Q 277.10 139.06 260.08 130.54 2
10         Q 148.06 74.53 131.03 66.02 1

Error Distribution

NCBI BLAST search of YQVQQAQNQQ
(Parameters: blastp, nr protein database, expect=20000, no filter, PAM30)
Other BLAST web gateways

Mascot:  http://www.matrixscience.com/